Browse of TCMCG057C36114 protein

CDS

Accession Number	TCMCG057C36114
gbkey	CDS
Protein Id	XP_018436251.1
Location	complement(join(43660686..43660793,43660873..43660999,43661122..43661312,43661385..43661457,43661542..43661597,43661713..43661883,43661977..43662090,43662161..43662253,43662649..43662855,43663426..43663503,43663624..43663710,43663812..43663893,43663975..43664087,43664268..43664418,43664646..43664764,43665314..43665511,43665621..43665744,43665891..43666010,43666097..43666227,43666578..43666715,43666820..43666921,43667258..43667464,43667553..43667669,43667879..43668022,43668383..43668472,43668867..43669094,43669170..43669292,43669409..43669494,43669927..43670086,43670640..43670750,43670839..43670943,43671027..43671101,43671198..43671293,43671389..43671529))
Gene	LOC108808636
GeneID	108808636
Organism	Raphanus sativus

Protein

Length	1421aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018580749.1
Definition	PREDICTED: nuclear pore complex protein NUP205-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Nuclear pore complex protein
KEGG_TC	1.I.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K14310        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005198        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005643        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006913        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0006997        [VIEW IN EMBL-EBI] GO:0006999        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0017056        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043933        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0044611        [VIEW IN EMBL-EBI] GO:0046907        [VIEW IN EMBL-EBI] GO:0051169        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTGTCGCCGAAAGAGTTGGCGGCCATAGTACAGTCTTCGCTGCTCGGAGCGTCGGGGACAAGCCCAACGCAGCGAATCGAACTCACTCACGCCCTTCGAAACTCCTTCTCCTCTTTCCAGAACCTCCTCTCTTTCCCGCCTCCGAAGGCGTCCGATAGAGCGCAAGTTCAGTCCAAAGAGATTCGACTTCCTGATTCGTTACCGATATCCTTGGATGAACAAGATGTTGCGATTAGCTTGAAACTGAGTGATGAGCTTCACCTAAATGAGATAGATTCTGTTCGTCTGCTTGTATCTGCAAACCAGGAGTGGGGCTTGATGGGACGGGACCCGCTTGAGATTCAACGGCTTGCAACTGGGCTATGGTACACAGGGAGAAGAGATCTTACATCAACGCTCTACACACTCCTCAGGGCAGTTGTTATGGACCAGGGGGTTGAACCTGATCTTATAGCTGACATTCAGGGCCTGTTGGAAGATCTGATTAAAGCCGGGCTCAGACAACGGTTGATTAATCTTATAAAGGAACTCAATCGGGAGGAACCTTCTGGCTTGGGTGGGCCCTTATGTGAGCAATACCTTATTGACTCGAGAGGTGCTCTTGTTGAACGAAGAGCTGTTGTTCATAGGGAAAGACTGATCCTGGGACATTGCCTTGTTCTTTCGATTTTGGTTGATAGACCTGGTCCAAAAGATGTGAAGGACATATACAATGTTTTAAAAGACAATGCAGTTCAATTAACTCAAGGAAATGACACCATAAAGTATCAGATTAGTTTCAGTCTTCTGTTTTCTCTCATCATTACCTTCATATCAGATGCCATCAGTGCACTATCGGATAAGTCATCTATGATATCTCAAGATGCTTCGTTTAGGACAGAATTTCAGAATATTGTCATGGCTTCTGGCAGTGACCTCCCTTCTGATGGCTTCATTGGTGGCGTAAGGCTTGCATGGGCTGTGCATTTAATGTTGATATATGATGGGATATCTGGAATGGATACAATTTCTGCTGCGTCAACAACTGATATGGGGCACATATGCTCCTGCCTGGAGTCCATCTTTTCAAAAAACGTGTTTCAGTTTTTGCTGGATAATGTTCTTCAAACTGCAGCCTACCAGAACGATGAGGAAGACATGATATACATATATAATGCGTATCTACACAAGTTAACCTCATGTTTTCTATCTCACCCGATTGCAAGAGACAAGGTGAAGGAATCAAAAGACATGGCTATGAGTGTTCTTAATTCTTACCGAATTAGTGATCCACTTGACGGCAGTATGCAGACTGAAGAGGCTGACAGGCCGCTACCATTTATTTCCCTTATGGAGTTTGTAAGCAATATCTATCAGAAAGAACCGGAGCTACTCTACGGGAATGATGTCTTGTGGACTTTTGTAAATTTTGCCGGAGAGGATCACACGAATTTCAAAACTCTTGTGGCATTTTTGGAAATGCTGCGCACCTTGGCTTCCACTCAAGAAGGTGCTTCTAAGGTCTATGAGTTGCTCAGAGGTACAGCATTTCGCAGTATAGGATGGGCCACTTTGTTTGATTGCATAGCAATTTACGATGACAAGTTCAAGCAGTCTCTTCAAACTGCTGGAGCGGTGATGCCAGACTTCCTGGAGGGCGATGCAAAAGCACTTGTTGCATATCTGAATGTACTTCAAAAGGTTGTTGAGAATGGTAATCCTACTGAGAGGAAAAATTGGTTTCCTGATATCGAACCATTTTTTAAGCTTCTTGGTTACGAAAACGTTCCTCCATATCTGAAGGGTGCTCTTAGGAAGACCATTGCTGCTTTTGTTCATGTATTTCCAGAAATGAGGGACCCTATCTGGGTTTTTCTTGAGCAGTATGATCTGCCGGTTGTTGTGGGATCACCGGTTGGAAAGACTGACCAATCTTCTCAGGTCTATGATATGCAGTTCGAGTTAAATGAAATTGAAGCAAGGAGAGAACAATATCCTTCAACAATATCGTTCCTTAATCTTATTAACGCTCTGATTGCCGGAGAGAAAGATGTGACTGATCGTGGTCGTAGATTTATTGGCATCTTCAAATTTGTTTATGATCATGTATTCGCCCCCTTTCCTCAAAGGGCATACTCGGATCCTTGTGAGAAGTGGCAATTGGTTGTGGCGTGCCTACAACATTTTCACATGATCTTAAGCATGTATGATATTCAGGAGGAGGATCTTGATGGATTTACGGAGCATTCACAGTTTCTGGTGTCAGCTGAAACATCTTTACTACAAACGCAGCTACCAGTTATAGAATTACTAAAAGATTTCATGAGTGGGAAAACACTGTATAGGAACCTTATGAGTGTCCTTCAGGTTGGGGTCAATTCCATCATGAGCGAGCGAATGAGTAAAACATACGGGAAGATCTTGGAAAAGGCTGTGCAACTCTCTTTGGAAATCTTATTACTTGTCTTTGAGAAGGATTTGCTTGTTTCTGATGTCTGGCGTCCGCTGTACCAGCCTTTGGATATAATTCTCTCGCAAGATCATAATCAAATTGTTGCCTTGCTGGAGTATGTCAGATATGATTCTCTTCCTCAGATTCAAAGATCATCAATCAAATTGATGAACATTTTAAGTTCTCGCTTGGTTGGTCTCGTTCCAATGCTGATTAAAATGAACGCTGCAAATTCCTTGATTGAGGATTATGCGTCCTGCCTTGAGCTACGACTTGAAGAGGGTGAAGTTGTAGAGAACAGTTGCGATGATCTAGGGGTCCTTATTATGCAGCTTCTGGTTGATTGTATCAACCGGCCTGCACCAAGTATCACACATTTGCTTCTTAAGTTTGACTTGGATGCCCCCGTGGAAGGCACAGTTTTGCAGCCTAAGTTCCACTACAGTTGTCTGAAGGTCATTCTTGAAATGCTGGAAAAACTTCCAAACCCTGATATAAACTTCTTACTCTTTGAGTGTGGCTTTCAGCTTTTGTGTGAGTTGAGTTTGGATCCACTAACTAGTGGTCCAATCATGGATCTCTTGAGCAGCAAAAAGTATCAGTTTTTTCTTCGGCATCTCGATACCATCGGTGTTGCTACCCTTCCAAAAAGAAGTGGTAGCCAGACGCTCCGTATTAGTTCACTTCATCAGAGGGCGTGGCTGTTAAAGCTCCTAGCTATTGCATTGCATAATGGTTCTGGAAGCAGTTCAGATCACCTAGAGGCGTGTCAGAGCATACTTTCTCATCTTTTTGGGCGGGAGGTAACTGAAGCAGGGAACGAACTTTATTTTTCCACTACATATCCTCTTCAGGATGGTCTTGATTATGCTGGAACTAGTTCAATCAGTAAAAGTAAGGTATTGGCGTTGCTTGAAATCCTCCAGTTTAGATCTCCTGATGCTTCGATGCAGCTTCCTCAAATTGTGTCAAGCCGAAAGTATGACACACTGGTAAAGGAAATACTTGAAAACCGTGATACCTCTGTAAGTGGCAGTATCTACTATTATTCTGAGCGTGGTGATCGTCTGATTGATCTATCTTCCTTCAGTAACAAACTCTATCAGGAACTACATTCTGGATTTCCCCTAGTGGACAGTTTTCAAAATGTTGCCGAGGTTAATGAAGTTAGAGAGACAATTCAACAGCTGTTGAAATGGGGGTGGAAGTATAATCGAAACCTTGAGGAGCAAGCCGCCCAACTGCATATGTTAGCTGGCTGGTCTCAGATTGTCGAGATATCTGCCTGCAGAAGAATATCTTCTCTGGATAATCGATCTGAAATTTTGTATCGGATACTTGACGCCTCTCTAAGTGCCTCTGCTTCTCCGGATTGTTCATTAAAAATGGCGTTTGTACTTACTCAGGTCGCCCTTACCTGCATTGCCAAACTTCGTGATGATAGATTTTTGTTTCATGGTGCCTTGAGTTCTGACACAGTGACATGTCTAGATGTCATGATGGTAAAACATTTATCCACTGGTGCTTGCCACTCACTTCTTTTGAAACTTGTTATGGCAATTCTAAGGCACGAGTCATCAGAATCCTTGAGAAGGCGCCAATATGCATTGCTCTTGAGCTATTTCCAGTATTGCCAGCATATGATTGCTCTGGAGGTGCCAACATCAGTCGTGCAATTCTTGTTGCTTAGTGATCAAGATGATGAAGATTTGGATATCCAGAAGATTGACAAGGAGCAGGCTGACCTTGCTCGTGCCAACTTTGCGTTTAATAAAATTCAACACACTATCCCACAACTTTTTCACTTTTATTTCCTTATATTTGCATATTAA

Protein:   MVSPKELAAIVQSSLLGASGTSPTQRIELTHALRNSFSSFQNLLSFPPPKASDRAQVQSKEIRLPDSLPISLDEQDVAISLKLSDELHLNEIDSVRLLVSANQEWGLMGRDPLEIQRLATGLWYTGRRDLTSTLYTLLRAVVMDQGVEPDLIADIQGLLEDLIKAGLRQRLINLIKELNREEPSGLGGPLCEQYLIDSRGALVERRAVVHRERLILGHCLVLSILVDRPGPKDVKDIYNVLKDNAVQLTQGNDTIKYQISFSLLFSLIITFISDAISALSDKSSMISQDASFRTEFQNIVMASGSDLPSDGFIGGVRLAWAVHLMLIYDGISGMDTISAASTTDMGHICSCLESIFSKNVFQFLLDNVLQTAAYQNDEEDMIYIYNAYLHKLTSCFLSHPIARDKVKESKDMAMSVLNSYRISDPLDGSMQTEEADRPLPFISLMEFVSNIYQKEPELLYGNDVLWTFVNFAGEDHTNFKTLVAFLEMLRTLASTQEGASKVYELLRGTAFRSIGWATLFDCIAIYDDKFKQSLQTAGAVMPDFLEGDAKALVAYLNVLQKVVENGNPTERKNWFPDIEPFFKLLGYENVPPYLKGALRKTIAAFVHVFPEMRDPIWVFLEQYDLPVVVGSPVGKTDQSSQVYDMQFELNEIEARREQYPSTISFLNLINALIAGEKDVTDRGRRFIGIFKFVYDHVFAPFPQRAYSDPCEKWQLVVACLQHFHMILSMYDIQEEDLDGFTEHSQFLVSAETSLLQTQLPVIELLKDFMSGKTLYRNLMSVLQVGVNSIMSERMSKTYGKILEKAVQLSLEILLLVFEKDLLVSDVWRPLYQPLDIILSQDHNQIVALLEYVRYDSLPQIQRSSIKLMNILSSRLVGLVPMLIKMNAANSLIEDYASCLELRLEEGEVVENSCDDLGVLIMQLLVDCINRPAPSITHLLLKFDLDAPVEGTVLQPKFHYSCLKVILEMLEKLPNPDINFLLFECGFQLLCELSLDPLTSGPIMDLLSSKKYQFFLRHLDTIGVATLPKRSGSQTLRISSLHQRAWLLKLLAIALHNGSGSSSDHLEACQSILSHLFGREVTEAGNELYFSTTYPLQDGLDYAGTSSISKSKVLALLEILQFRSPDASMQLPQIVSSRKYDTLVKEILENRDTSVSGSIYYYSERGDRLIDLSSFSNKLYQELHSGFPLVDSFQNVAEVNEVRETIQQLLKWGWKYNRNLEEQAAQLHMLAGWSQIVEISACRRISSLDNRSEILYRILDASLSASASPDCSLKMAFVLTQVALTCIAKLRDDRFLFHGALSSDTVTCLDVMMVKHLSTGACHSLLLKLVMAILRHESSESLRRRQYALLLSYFQYCQHMIALEVPTSVVQFLLLSDQDDEDLDIQKIDKEQADLARANFAFNKIQHTIPQLFHFYFLIFAY